CerealsDB Webtools

Retrieve genotyping data derived from the 820K and 35K arrays.
QTL database - Select a phenotype to obtain all QTLs associated with it.
Cross-species SNPs - Find SNP containing sequences that align to regions in Brachypodium, Rice and Sorghum.
SNP Probe Locator - Search for SNP probes located on the same chromosome in the IWGSC v1.0 assembly.
Dendrograms - View dendrograms based on data obtained using the 820K Array or 35K Array.
Putative Introgression Plotter - Search for putative introgressions in wheat varieties.
Functional SNPs - Search non-synonymous (missense) SNP; i.e., SNPs that change protein amino acid sequence.
Minimal Marker set - see the set of 32 SNP markers and identify varieties and their profiles.

Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

Maintained by Mark Winfield.