iSelect SNP Summary Information
Summary information for the SNP BS00123973 is listed below:Map location in various crosses
Avalon X Cadenza | 5D |
Savannah X Rialto | 5D |
Cross 1 | |
Cross 2 | 5D |
Cross 3 | 5D |
Cross 4 | |
Cross 5 | 5D |
Cross 6 | 5D |
Deletion lines | |
IWGSC | 5DL |
BLAST | 5D |
9K iSelect array |
Consensus Chromosome: 5D
Sequence
BLAST sequence
To BLAST the above sequence against our SNP database click on the 'Queryi SNP databse' button below. You may select an e-value cut-off for this search.
Alternatively, you may perform a BLASTN against Brachypodium, Rice or Rye sequences. Use the drop-down fields below to select the parameters (database and e-value cutoff value) you wish to use and then click the grey 'BLAST' button.   At present your search can only be performed against Brachypodium distachyon, rice ( Oryza sativa ) or rye ( Secale cereale ) libraries.   However, this site is actively being worked on and we hope to be able to add additional libraries.
Based at the University of Bristol with support from BBSRC.
Maintained by Mark Winfield.