<  previous  SNP report 8   next   >
 
cluster_2_contig_6

putative SNPs, mean score 0.00

Key to sequences:


A -orin_26_BE415853
B -orin_26_BE415971
C -orin_26_BE417083
D -orin_26_BE417286
E -ovosibirskaya_67_BE419415
F -ovosibirskaya_67_BE419692
G Brevor_BG606110
H Brevor_BG606558
I Brevor_BQ579216
J Brevor_BQ579348
K Brevor_BQ579600
L Brevor_BQ579805
M Brevor_BQ841746
N Brevor_BQ841977
O Brevor_BQ842235
P Brevor_BQ842431
Q Brevor_BQ842651
R Brevor___BE515354
S Brevor___BE515917
T Butte_86_BQ804213
U Butte_86_BQ804847
V Butte_86_BQ806677
W Butte_86_BQ806944
X Butte_86_BQ807280
Y Catoctin_BE412310
Z Cheyenne_BE398250
a Cheyenne_BE398453
b Cheyenne_BE398557
c Cheyenne_BE399403
d Cheyenne_BE399420
e Cheyenne_BE422504
f Cheyenne_BE422757
g Cheyenne_BE423068
h Cheyenne_BE423222
i Cheyenne_BE424556
j Cheyenne_BQ167804
k Cheyenne_BQ168289
l Chinese_Spring_BE400022
m Chinese_Spring_BE404871
n Chinese_Spring_BE405967
o Chinese_Spring_BE406248
p Chinese_Spring_BE425631
q Chinese_Spring_BE471165
r Chinese_Spring_BE490106
s Chinese_Spring_BE490710
t Chinese_Spring_BE498975
u Chinese_Spring_BE499111
v Chinese_Spring_BE500407
w Chinese_Spring_BE517779
x Chinese_Spring_BE518019
y Chinese_Spring_BE518108
z Chinese_Spring_BE591058
A Chinese_Spring_BE604912
B Chinese_Spring_BE606596
C Chinese_Spring_BF200953
D Chinese_Spring_BF202393
E Chinese_Spring_BF202510
F Chinese_Spring_BF202896
G Chinese_Spring_BF473297
H Chinese_Spring_BF474400
I Chinese_Spring_BF475148
J Chinese_Spring_BF482480
K Chinese_Spring_BF482881
L Chinese_Spring_BF482992
M Chinese_Spring_BF484175
N Chinese_Spring_BF484911
O Chinese_Spring_BG262276
P Chinese_Spring_BG313739
Q Chinese_Spring_BG604985
R Chinese_Spring_BG605324
S Chinese_Spring_BI479736
T Chinese_Spring_BJ207077
U Chinese_Spring_BJ207707
V Chinese_Spring_BJ207785
W Chinese_Spring_BJ207916
X Chinese_Spring_BJ207941
Y Chinese_Spring_BJ211205
Z Chinese_Spring_BJ211577
a Chinese_Spring_BJ211647
b Chinese_Spring_BJ211675
c Chinese_Spring_BJ212088
d Chinese_Spring_BJ212707
e Chinese_Spring_BJ212953
f Chinese_Spring_BJ213559
g Chinese_Spring_BJ213583
h Chinese_Spring_BJ213688
i Chinese_Spring_BJ213764
j Chinese_Spring_BJ213798
k Chinese_Spring_BJ214360
l Chinese_Spring_BJ215202
m Chinese_Spring_BJ217825
n Chinese_Spring_BJ217993
o Chinese_Spring_BJ218433
p Chinese_Spring_BJ218580
q Chinese_Spring_BJ219132
r Chinese_Spring_BJ219538
s Chinese_Spring_BJ221064
t Chinese_Spring_BJ221268
u Chinese_Spring_BJ221603
v Chinese_Spring_BJ222151
w Chinese_Spring_BJ222167
x Chinese_Spring_BJ222254
y Chinese_Spring_BJ222752
z Chinese_Spring_BJ222765
A Chinese_Spring_BJ223120
B Chinese_Spring_BJ223353
C Chinese_Spring_BJ223400
D Chinese_Spring_BJ223440
E Chinese_Spring_BJ223770
F Chinese_Spring_BJ224338
G Chinese_Spring_BJ224430
H Chinese_Spring_BJ224518
I Chinese_Spring_BJ224544
J Chinese_Spring_BJ225596
K Chinese_Spring_BJ225716
L Chinese_Spring_BJ225991
M Chinese_Spring_BJ226291
N Chinese_Spring_BJ227116
O Chinese_Spring_BJ227216
P Chinese_Spring_BJ228510
Q Chinese_Spring_BJ228976
R Chinese_Spring_BJ229186
S Chinese_Spring_BJ229309
T Chinese_Spring_BJ230490
U Chinese_Spring_BJ231201
V Chinese_Spring_BJ231839
W Chinese_Spring_BJ231887
X Chinese_Spring_BJ231923
Y Chinese_Spring_BJ234402
Z Chinese_Spring_BJ234415
a Chinese_Spring_BJ234650
b Chinese_Spring_BJ234665
c Chinese_Spring_BJ237050
d Chinese_Spring_BJ237251
e Chinese_Spring_BJ237291
f Chinese_Spring_BJ237501
g Chinese_Spring_BJ242054
h Chinese_Spring_BJ242501
i Chinese_Spring_BJ242811
j Chinese_Spring_BJ243109
k Chinese_Spring_BJ243567
l Chinese_Spring_BJ243976
m Chinese_Spring_BJ245299
n Chinese_Spring_BJ246655
o Chinese_Spring_BJ247195
p Chinese_Spring_BJ247246
q Chinese_Spring_BJ247969
r Chinese_Spring_BJ253253
s Chinese_Spring_BJ254100
t Chinese_Spring_BJ255636
u Chinese_Spring_BJ257355
v Chinese_Spring_BJ258825
w Chinese_Spring_BJ260501
x Chinese_Spring_BJ261170
y Chinese_Spring_BJ262937
z Chinese_Spring_BJ262988
A Chinese_Spring_BJ264018
B Chinese_Spring_BJ266892
C Chinese_Spring_BJ267222
D Chinese_Spring_BJ267840
E Chinese_Spring_BJ267878
F Chinese_Spring_BJ270057
G Chinese_Spring_BJ270508
H Chinese_Spring_BJ271782
I Chinese_Spring_BJ271821
J Chinese_Spring_BJ272004
K Chinese_Spring_BJ272813
L Chinese_Spring_BJ275054
M Chinese_Spring_BJ275519
N Chinese_Spring_BJ277053
O Chinese_Spring_BJ277700
P Chinese_Spring_BJ277801
Q Chinese_Spring_BJ278105
R Chinese_Spring_BJ278185
S Chinese_Spring_BJ278249
T Chinese_Spring_BJ278416
U Chinese_Spring_BJ278545
V Chinese_Spring_BJ278771
W Chinese_Spring_BJ279152
X Chinese_Spring_BJ279173
Y Chinese_Spring_BJ279328
Z Chinese_Spring_BJ279365
a Chinese_Spring_BJ279574
b Chinese_Spring_BJ279760
c Chinese_Spring_BJ279992
d Chinese_Spring_BJ280249
e Chinese_Spring_BJ280323
f Chinese_Spring_BJ281117
g Chinese_Spring_BJ282893
h Chinese_Spring_BJ283236
i Chinese_Spring_BJ283301
j Chinese_Spring_BJ283464
k Chinese_Spring_BJ283600
l Chinese_Spring_BJ283822
m Chinese_Spring_BJ284744
n Chinese_Spring_BJ284783
o Chinese_Spring_BJ284966
p Chinese_Spring_BJ285190
q Chinese_Spring_BJ285461
r Chinese_Spring_BJ285483
s Chinese_Spring_BJ285961
t Chinese_Spring_BJ288211
u Chinese_Spring_BJ288520
v Chinese_Spring_BJ288593
w Chinese_Spring_BJ288792
x Chinese_Spring_BJ290109
y Chinese_Spring_BJ290329
z Chinese_Spring_BJ290330
A Chinese_Spring_BJ290347
B Chinese_Spring_BJ290365
C Chinese_Spring_BJ290643
D Chinese_Spring_BJ291305
E Chinese_Spring_BJ291533
F Chinese_Spring_BJ291545
G Chinese_Spring_BJ291766
H Chinese_Spring_BJ291767
I Chinese_Spring_BJ291881
J Chinese_Spring_BJ292559
K Chinese_Spring_BJ293006
L Chinese_Spring_BJ293184
M Chinese_Spring_BJ293629
N Chinese_Spring_BJ293724
O Chinese_Spring_BJ294452
P Chinese_Spring_BJ294484
Q Chinese_Spring_BJ294542
R Chinese_Spring_BJ295073
S Chinese_Spring_BJ296347
T Chinese_Spring_BJ296840
U Chinese_Spring_BJ296880
V Chinese_Spring_BJ297047
W Chinese_Spring_BJ298162
X Chinese_Spring_BJ298393
Y Chinese_Spring_BJ298394
Z Chinese_Spring_BJ299392
a Chinese_Spring_BJ299571
b Chinese_Spring_BJ300075
c Chinese_Spring_BJ300279
d Chinese_Spring_BJ300491
e Chinese_Spring_BJ300956
f Chinese_Spring_BJ301231
g Chinese_Spring_BJ301568
h Chinese_Spring_BJ301676
i Chinese_Spring_BJ301748
j Chinese_Spring_BJ302147
k Chinese_Spring_BJ302345
l Chinese_Spring_BJ302495
m Chinese_Spring_BJ302523
n Chinese_Spring_BJ302586
o Chinese_Spring_BJ302738
p Chinese_Spring_BJ303003
q Chinese_Spring_BJ303138
r Chinese_Spring_BJ304780
s Chinese_Spring_BJ305080
t Chinese_Spring_BJ305509
u Chinese_Spring_BJ305789
v Chinese_Spring_BJ306312
w Chinese_Spring_BJ307035
x Chinese_Spring_BJ307382
y Chinese_Spring_BJ307969
z Chinese_Spring_BJ308173
A Chinese_Spring_BJ308332
B Chinese_Spring_BJ308361
C Chinese_Spring_BJ308855
D Chinese_Spring_BJ308987
E Chinese_Spring_BJ310615
F Chinese_Spring_BJ311093
G Chinese_Spring_BJ311383
H Chinese_Spring_BJ311635
I Chinese_Spring_BJ312428
J Chinese_Spring_BJ312591
K Chinese_Spring_BJ312962
L Chinese_Spring_BJ312996
M Chinese_Spring_BJ314898
N Chinese_Spring_BJ316040
O Chinese_Spring_BJ316483
P Chinese_Spring_BJ316901
Q Chinese_Spring_BJ317217
R Chinese_Spring_BJ318692
S Chinese_Spring_BJ320858
T Chinese_Spring_BJ321526
U Chinese_Spring_BJ322011
V Chinese_Spring_BJ322459
W Chinese_Spring_BJ322768
X Chinese_Spring_BQ166787
Y Chinese_Spring_BQ294836
Z Chinese_Spring_BQ483864
a Chinese_Spring_BQ743866
b Chinese_Spring_BU099486
c Chinese_Spring_BU100991
d Chinese_Spring_BU101037
e Chinese_Spring_BU101087
f Chinese_Spring_CA497061
g Chinese_Spring_CA497735
h Chinese_Spring_CA498030
i Chinese_Spring_CA498165
j Chinese_Spring_CA498389
k Chinese_Spring_CA500152
l Chinese_Spring_CA500894
m Chinese_Spring_CA501525
n Chinese_Spring_CA595333
o Chinese_Spring_CA597476
p FHB148_BQ903269
q Glenlea_BQ244709
r Glenlea_BQ247055
s PI_137739_CA726031
t PI_137739_CA726121
u PI_137739_CA726972
v PI_137739_CA730415
w PI_137739_CA733819
x PI_137739_CA741155
y Spring_wheat_CA702728
z Spring_wheat_CA709724
A Spring_wheat_CA712449
B Spring_wheat_CA720142
C Stephens_CA601654
D Stephens_CA603876
E Stephens_CA605303
F Stephens_CA611435
G Stephens_CA611897
H Stephens_CA612732
I Stephens_CA613314
J Stephens_CA615791
K Stephens_CA616025
L Stephens_CA620767
M Stephens_CA628141
N Stephens_CA630177
O Stephens_CA631334
P Stephens_CA632165
Q Stephens_CA632295
R Stephens_CA635679
S Stephens_CA636939
T Stephens_CA638271
U Stephens_CA640700
V Stephens_CA644341
W Stephens_CA653620
X Stephens_CA659153
Y Stephens_CA661294
Z Stephens_CA667214
a Stephens_CA671888
b Stephens_CA675832
c Stephens_CA677740
d Stephens_CA678667
e Stephens_CA679789
f Stephens_CA680066
g Stephens_CA693417
h Stephens_CA693449
i Stephens_CA695173
j Stephens_CA696704
k Sumai3_BM136009
l Sumai3_BM136519
m Sumai3_BM138407
n Wyuna_AW448051
o Wyuna_BE402511
p Wyuna_BQ605966
q Wyuna_BQ607874
r Wyuna_BQ608578
s Wyuna_BQ609227
t florida_AL828841
u hard_red_spring_CA700819
v hard_red_spring_CA700840
w hard_red_spring_CA700841
x mercia_AL816655
y mercia_AL817093
z mercia_AL817400
A mercia_AL818142
B mercia_AL818313
C mercia_AL818887
D mercia_AL819008
E mercia_AL819387
F mercia_AL827992
G mercia_AL829518

 
Summary of SNPs:  

base
ABCDEFGHIJKLMNOPQRSTUVWXYZabcdefghijklmnopqrstuvwxyzABCDEFGHIJKLMNOPQRSTUVWXYZabcdefghijklmnopqrstuvwxyzABCDEFGHIJKLMNOPQRSTUVWXYZabcdefghijklmnopqrstuvwxyzABCDEFGHIJKLMNOPQRSTUVWXYZabcdefghijklmnopqrstuvwxyzABCDEFGHIJKLMNOPQRSTUVWXYZabcdefghijklmnopqrstuvwxyzABCDEFGHIJKLMNOPQRSTUVWXYZabcdefghijklmnopqrstuvwxyzABCDEFGHIJKLMNOPQRSTUVWXYZabcdefghijklmnopqrstuvwxyzABCDEFG
Min. informativeCosegregationWeighted
cosegregation (%)
41
........G.GGGG......GGGGG.GG.......GGG.GG..........................................G.................G...G........T..............G...G..........GG......G.......................G........................G..G.....G..G................................G.....G...............................GG...G.GG..G.T..G.GG..GGGG.............G.G..G..G.G.............GG..GGGGG..G..G.GGG..G..
2
20/71
5 
60
......CCC.CCCC......CCCCC.CC.....C.CCC.CC.C.CCCCCCCCCC.CCCCCC....CCC.CC........A...CCC.............CCCC..C.CCCC...C.C...........CC...C......ACC.CCC..CC.C......C................C.......CC...............CC.CCCCCCC..C...C.C.................C..CC...CC..C..C.C.............C..C.CC.........CC.C.C.CC..C.CC.C.CC..CCCC.............C.C..C..C.C.............CCC.CCCCC..C..C.CCC.CC..
2
22/71
11 
61
......TTT.TTTT......TTTTT.TT.....T.TTT.TT.T.TTTTTTTTTT.TTTTTT....TTT.TT........G...TTT.............TTTT..T.TTTT...T.T...........TT...T......GTT.TTT..TT.T......T................T.......TT...............TT.TTTTTTT..T...T.T.................T.TTT...TT..T..T.T.............T..TTTT.........TT.T.T.TT..T.TT.T.TT..TTTT.............T.T..T..T.T.............TTT.TTTTT..T..T.TTT.TT..
2
22/71
11 
63
......CCC.CCCC......CCCCC.CC.....C.CCC.CC.C.CCCCCCCCCC.CCCCCC....CCC.CCA.......C...CCC.............CCCC..C.CCCC...C.C...........CC...C......CCC.CCC..CC.C......C...........A....C....C..CC...............CC.CCCCCCC..C...C.C.................C.CCC..ACC..C..C.C.............C..CCCC.........CC.C.C.CC..C.CC.C.CC..CCCC.............C.C..C..C.C.............CCC.CCCCC..C..C.CCC.CC..
3
21/71
11 
64
......AAA.AAAA......AAAAA.AA.....A.AAA.AA.A.AAAAAAAAAA.AAAAAA....AAA.AAG.A.....A...AAA.............AAAA..A.AAAA...A.A...........AA...A......AAA.AAA..AA.A......A...........GA...A....A..AA...............AA.AAAAAAA..A...A.A.................A.AAA..GAA..A..A.A.............A..AAAA.........AA.A.A.AA..A.AA.A.AA..AAAA.............A.A..A..A.A.............AAA.AAAAA..A..A.AAA.AA..
3
21/71
11 
69
......CCC.CCCC......CCCCC.CC.....C.CCC.CC.C.CCCCCCCCCC.CCCCCC....CCC.CCC.C.C...C...CCC.............CCCC..C.CCCCA..C.C...........CC.C.C......CCC.CCC..CC.C.....CC....C......CC.A.C....C..CC...............CC.CCCCCCC..C.A.C.C.................C.CCC..CCC..C..C.C.............C..CCCCA........CC.C.C.CC..C.CC.CCCC..CCCC.............C.C..C..C.C.............CCC.CCCCC..C..C.CCC.CC..
4
20/71
11 
70
......AAA.AAAA......AAAAA.AA.....A.AAA.AA.A.AAAAAAAAAA.AAAAAA....AAA.AAA.A.A...A...AAA.............AAAA..A.AAAAG..A.A...........AA.A.A......AAA.AAA..AA.A.....AA....A......AA.G.A....A..AA...............AA.AAAAAAA..A.G.A.A.................A.AAA..AAA..A..A.A.............A..AAAAG........AA.A.A.AA..A.AA.AAAA..AAAA.............A.A..A..A.A.............AAA.AAAAA..A..A.AAA.AA..
4
20/71
11 
73
......GGG.GGGG......GGGGG.GGG....G.GGGGGG.G.GGGGGGGGGG.GGGGGG....GGG.GGGAG.G...G...GGG.............GGGG..G.GGGGG..G.G...........GG.G.G......GGG.GGG..GG.G.....GGG...G......GG.G.G....G..GG...............GG.GGGGGGG..G.GAG.G.................G.GGG.AGGG..GA.G.G.............G..GGGGG........GG.G.G.GG..G.GG.GGGG..GGGG.............G.G..G..G.G.............GGG.GGGGG..G..G.GGG.GG..
4
19/71
11 
78
......CCC.CCCC......CCCCC.CCC....C.CCCCCC.C.CCCCCCCCCC.CCCCCC....CCC.CCCCC.C...CA..CCC.............CCCC..C.CCCCC..C.C...........CC.C.C......CCCACCC..CC.C.....CCC...C......CC.C.CA...CC.CCA..............CC.CCCCCCCC.C.CCCAC.................C.CCC.CCCC..CC.C.C.............C..CCCCC........CC.C.C.CC..C.CC.CCCC..CCCC.............C.C..C..C.C.............CCC.CCCCC..C..C.CCC.CC..
5
20/71
12 
79
......CCC.CCCC......CCCCC.CCC....C.CCCCCC.C.CCCCCCCCCC.CCCCCC.CC.CCC.CCCCC.C...CG..CCC.............CCCC..CCCCCCC..C.C...........CC.C.C......CCCGCCC..CC.C.....CCC...C......CC.C.CGC..CC.CCG..............CC.CCCCCCCC.C.CCCGC.................C.CCC.CCCC..CC.C.C.............C..CCCCC........CC.C.C.CC..C.CC.CCCC..CCCC.............C.C..C..C.C.............CCC.CCCCC..C..C.CCC.CC..
5
20/71
13 
88
......TTT.TTTT......TTTTT.TTT.T..T.TTTTTT.T.TTTTTTTTGT.TTTTTT.TT.TTG.TTTTT.T.TTTT..TTTT............TTTTT.TTTTTTT.TTTT..........TTT.T.T......TTTTTTT..TT.T.....TTT.TTT.....TTT.TTTTT..TT.TTTT.............TT.TTTTTTTTTTTTTTTTTT...............TTTTT.TTTTTTTT.TTT.............T.TTTTTTT.......TT.T.T.TT..T.TT.TTTT..TTTT.............T.T..T..T.T.............TTT.TTTTT..T..T.TTT.TT..
2
21/71
15 
111
......CCC.CCCC......CCCCC.CCC.C..C.CCCCCC.C.CCCCCCCCCC.CCCCCC.CCCCCC.CCCCC.C.CCCC..CCCC............CCCCC.CCCCCCC.CCCC..........CCC.C.C......CCCCCCC..CCCC.....CC