Core Marker Set on TaqMan platform

This core set of 935 SNPs have been selected from our validated assays. The markers have been selected to be evenly distributed across the genome, using the Avalon x Cadenza genetic map and taking into account individual chromosome map lengths and amount of marker clustering. Where possible, the markers have also been selected to be co-dominant and polymorphic on the CIRC set of 46 varieties.

1 2 3 4 5 6 7 Total
Total 122 137 142 115 168 124 152 960
A 32 49 54 46 53 46 60 340
B 53 42 54 46 70 40 44 347
D 37 46 32 23 47 38 48 273

To download an Excel Spreadsheet of the Core Markers set, please click here.




Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

Maintained by Paul Wilkinson.


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